{Ti|hdZddlmZGddejZGddejZy)zrClasses corresponding to NeXML trees. See classes in ``Bio.Nexus``: Trees.Tree, Trees.NodeData, and Nodes.Chain. )BaseTreeceZdZdZddZy)TreezNeXML Tree object.Ncrtjj||xs t|||||_y)z:Instantiate a NeXML tree object with the given parameters.)rootrootedidnameN)rr__init__Cladeweight)selfrrr r r s B/home/agent/.local/lib/python3.12/site-packages/Bio/Phylo/NeXML.pyr z Tree.__init__s3  tuwv"4   )NFNN?__name__ __module__ __qualname____doc__r rrrrs rrc"eZdZdZ ddZy)r zNeXML Clade (sub-tree) object.Nc tjj|||||||_|j D]\}}t |||y)z-Initialize parameters for NeXML Clade object.) branch_lengthr clades confidenceN)rr r commentitemssetattr) rrr rrrkwargskeyvalues rr zClade.__init__sX  '!    ,,. &JC D#u % &r)rNNNNrrrrr r s(  &rr N)r Bio.Phylorrr rrrr$s/ 8==&HNN&r