{TihdZddlmZGddejZGddejZy)zClasses corresponding to Newick trees, also used for Nexus trees. See classes in ``Bio.Nexus``: Trees.Tree, Trees.NodeData, and Nodes.Chain. )BaseTreeceZdZdZddZy)TreezNewick Tree object.Ncrtjj||xs t|||||_y)z/Initialize parameters for a Newick tree object.)rootrootedidnameN)rr__init__Cladeweight)selfrrr r r s C/home/agent/.local/lib/python3.12/site-packages/Bio/Phylo/Newick.pyr z Tree.__init__s3  tuwv"4   )NFNNg?__name__ __module__ __qualname____doc__r rrrrs rrceZdZdZ ddZy)r zNewick Clade (sub-tree) object.NcZtjj|||||||_y)z0Initialize parameters for a Newick Clade object.) branch_lengthr clades confidenceN)rr r comment)rrr rrrs rr zClade.__init__s3  '!   r)NNNNNrrrrr r s)TX rr N)r Bio.Phylorrr rrrrs/ 8==HNNr